PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65824.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 564aa MW: 60453.9 Da PI: 5.9233

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7e-09	381	429	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq RDX65824.1 381 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 429 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MSDKEKFEVD RNGDPMSYSS GMHSDWRFGG ANIANSSVGL VAMGNSMNVS RGDLIGSSSC 60 SSASMVDSFG PNYWDNPTSS QNLGFCDINV HNNGGSSNTT GIRKDGFGFG RAGQDHHHHH 120 GTLEMGWNPA NSMLPNGPGM FPHSLSQFPS DSGFIERAAR FSCFSGGNFG DMVNSYGIPQ 180 SMGLYAGSGG TMHGARDANA VVGLGLKSVI GGQSQESDLN VVEATKDVSP SVEHLAPKGS 240 PLKSDKRSES HAMSQDEGKQ SLVRPANESD RAESSDDDGG GGGQDDSPML EGTSGEPSIK 300 GLNSKKRKRS GQDADNDKAN GAPELPSEGA KDNSENQQKG DQQPTSTTKA SGKNTKLGSQ 360 FSDPPKEEYI HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCSK VTGKAVMLDE 420 IINYVQSLQR QVEFLSMKLA TVNPRLDFNI EGLLAKDILQ QRPGPSALGF PLDMSMAFPP 480 LHPSQPGLIH PIIPNMANSS DILHRTIHPQ LAPLNGLFKE PNQLPDVWED ELHNVVQMSF 540 ATTAPMSSQD VDGTVSASQM KVEL

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MSDKEKFEVD RNGDPMSYSS GMHSDWRFGG ANIANSSVGL VAMGNSMNVS RGDLIGSSSC  60
SSASMVDSFG PNYWDNPTSS QNLGFCDINV HNNGGSSNTT GIRKDGFGFG RAGQDHHHHH  120
GTLEMGWNPA NSMLPNGPGM FPHSLSQFPS DSGFIERAAR FSCFSGGNFG DMVNSYGIPQ  180
SMGLYAGSGG TMHGARDANA VVGLGLKSVI GGQSQESDLN VVEATKDVSP SVEHLAPKGS  240
PLKSDKRSES HAMSQDEGKQ SLVRPANESD RAESSDDDGG GGGQDDSPML EGTSGEPSIK  300
GLNSKKRKRS GQDADNDKAN GAPELPSEGA KDNSENQQKG DQQPTSTTKA SGKNTKLGSQ  360
FSDPPKEEYI HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCSK VTGKAVMLDE  420
IINYVQSLQR QVEFLSMKLA TVNPRLDFNI EGLLAKDILQ QRPGPSALGF PLDMSMAFPP  480
LHPSQPGLIH PIIPNMANSS DILHRTIHPQ LAPLNGLFKE PNQLPDVWED ELHNVVQMSF  540
ATTAPMSSQD VDGTVSASQM KVEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	305	310	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-111	bHLH family protein