PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX65885.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family Whirly
Protein Properties Length: 245aa    MW: 27395.4 Da    PI: 10.3983
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX65885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly181.31.8e-56712053137
      Whirly   3 yktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpd 101
                   +kaa+++ + +ptf++ldsg+++++r+G++++ ++ +++erkydWek+q+falsatev++l+ +++++sceffhdp++ +sn+G+vrk+l+++P+++
  RDX65885.1  71 TNGKAAFSLSPCLPTFTKLDSGTVVVDRRGSMMMIFMHSIGERKYDWEKRQRFALSATEVGSLITMGPQDSCEFFHDPSMLSSNAGQVRKSLSIKPHTN 169
                 579************************************************************************************************ PP

      Whirly 102 GsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137
                   G+fv+l+v n+l++++++f+vPv+ aef+v++++
  RDX65885.1 170 NNGYFVSLTVVNNLLNTKDHFTVPVTTAEFSVMKTA 205
                 **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
VTASFHERRE ERNRASRVKR KEKMLKLSRV LPLTSTSRHQ LLEVLSFRNA EAAISTATNN  60
YAAKGIALYI TNGKAAFSLS PCLPTFTKLD SGTVVVDRRG SMMMIFMHSI GERKYDWEKR  120
QRFALSATEV GSLITMGPQD SCEFFHDPSM LSSNAGQVRK SLSIKPHTNN NGYFVSLTVV  180
NNLLNTKDHF TVPVTTAEFS VMKTACSFAL PRIMGWDQIT NQQSRGTVGL QPKGGSQVLD  240
LEWEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.13e-80Whirly family protein