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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX65912.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | NAC | ||||||||
| Protein Properties | Length: 325aa MW: 37359.1 Da PI: 7.3207 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 171.6 | 2.5e-53 | 10 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96
+ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL+ k ++ + ++e yfFs++dkky+tg+r+nrat++g+Wkatg+dk++++++
RDX65912.1 10 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKdKcRIGSgPQNEFYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTN 107
69****************************.9***************94344444245599************************************** PP
NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128
++ +g++ktLvfy+grap+g+ktdW+mheyrl
RDX65912.1 108 SKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 139
******************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 325 aa Download sequence |
MMPGNGQLTV PPGFRFHPTD EELLYYYLRK KVSYEAIDLD VIREVDLNKL EPWDLKDKCR 60 IGSGPQNEFY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIYHTNSKR IGMRKTLVFY 120 TGRAPHGQKT DWIMHEYRLD EDDADVQEDG WVVCRVFKKK NQNRGYQQEI EEEEHITHMR 180 TSGPCHVLEP KHHMQGGLYD YNFDGTMHLP QLFSPESAVA PPTTTSLASS MNAMDILECS 240 QNLLRLTTTG CGLNLMQQQG ERFSGDWSFL DKLLASHHGM DHQHHPQSKC NPTHQAATTP 300 VGTSAQKFPF HYLGCETHDI MKFSK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G79580.1 | 1e-106 | NAC family protein | ||||




