PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX65913.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 782aa    MW: 84721.9 Da    PI: 6.0099
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX65913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.8e-20109164156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  RDX65913.1 109 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 164
                 688999***********************************************999 PP
2START221.72.3e-693035231206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela +a++el+ +a+ +ep+W +      + +n+de++++f+++ +     ++ ea+r+++vv+m++++lve+l+d++ qW++ +     +a+tlev+s
  RDX65913.1 303 ELAVAAMEELIGMAQMGEPLWLTTLdgtaTVLNEDEYIRSFPRGIGpkpagFKCEASRETAVVIMNHVNLVEILMDVN-QWSTVFSgivsRAMTLEVLS 400
                 57899********************999999************999********************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 +g      galq+m+ae q++splvp R+++fvRy++q+g+g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skv+wvehv++++r +h
  RDX65913.1 401 TGvagnynGALQVMTAEVQVPSPLVPtRESYFVRYCKQHGDGTWAVVDVSLDNLRPSP----SARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDERGVH 495
                 ********************************************************99....5************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +l+++lv+sg+a+gak+w atl+rqce+
  RDX65913.1 496 NLYKQLVSSGHAFGAKRWIATLDRQCER 523
                 **************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 782 aa     Download sequence    
MPAGIMIPAR NMPSMIGRNG NVGGFGLSSG LSLGQIENHK ASESQRSVEM FQPNLMEAGQ  60
LHPLDMPQNT SESDVPRIRE DDFDSATKSG SENQDAASGE DQDPRPNKKK RYHRHTQHQI  120
QEMEAFFKEC PHPDDKQRKE LSRELGLEPL QVKFWFQNKR TQMKTQHERH ENTSLRTENE  180
KLRADNMRFR EALGNASCPN CGGPTAIGEM SFDEHHLRLE NARLREEIDR ISAIAAKYVG  240
KPVVSYPLLS PSSVPPRPLE LGIGGGFGGQ HGGIGGDMYG GAAGDLLRSI SGPTEADKPI  300
IIELAVAAME ELIGMAQMGE PLWLTTLDGT ATVLNEDEYI RSFPRGIGPK PAGFKCEASR  360
ETAVVIMNHV NLVEILMDVN QWSTVFSGIV SRAMTLEVLS TGVAGNYNGA LQVMTAEVQV  420
PSPLVPTRES YFVRYCKQHG DGTWAVVDVS LDNLRPSPSA RCRRRPSGCL IQEMPNGYSK  480
VIWVEHVEVD ERGVHNLYKQ LVSSGHAFGA KRWIATLDRQ CERLASAMAT NIPSVDVGVI  540
TNQDGRKSML KLAERMVISF CAGVSASTAH TWTTLSGTGA DDVRVMTRKS VDDPGRPPGI  600
VLSAATSFWL PVSPKRVFEF LRDENSRSEW DILSNGGVVQ EMAHIANGRD TGNCVSLLRV  660
NSANSSQSNM LILQESCADS TGSFVIYAPV DIVAMNVVLN GGDPDYVALL PSGFAILPDG  720
TTAHGGGIGD TGHGGSLLTV AFQILVDSVP TAKLSLGSVA TVNNLIACTV ERIKAALSAE  780
VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein