PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65965.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 124aa MW: 13795.9 Da PI: 8.8804

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	140.2	6.9e-44	7	107	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+C++dC++apyfp+++ +kfa vhk+FG sn++k+lk+lp ++r da+sslvyeA+ar+r+PvyG+vg+i++lq q+++l+++lal+++ RDX65965.1 7 PCASCKLLRRRCSQDCIFAPYFPSSDLHKFATVHKVFGCSNISKMLKDLPVHQRADAVSSLVYEANARLRNPVYGCVGTISSLQTQVSELQNQLALAQA 105 7***********************************************************************************************998 PP DUF260 100 el 101 ++ RDX65965.1 106 KI 107 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence
MGGNSLPCAS CKLLRRRCSQ DCIFAPYFPS SDLHKFATVH KVFGCSNISK MLKDLPVHQR 60 ADAVSSLVYE ANARLRNPVY GCVGTISSLQ TQVSELQNQL ALAQAKILNM QSMYREVCSY 120 NYPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	5e-60	LBD family protein