PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX66080.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 378aa MW: 42207.4 Da PI: 6.7906

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX66080.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.8	1.5e-17	202	256	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k RDX66080.1 202 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 256 778899***********************************************98 PP
2	HD-ZIP_I/II	128	4e-41	202	292	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk RDX66080.1 202 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELR-ALK 292 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MELGLSLGDS SRPLLGFMEK PREASNQLGL GFNTTLSIGP IITRQKDQQH EQEEYEEEET 60 KPKSNNNNIN TRRTRDPNDL SSKPNNNNNP VLHQLDLLPQ LSFPWHPPSE NGSFSSELGG 120 SSRGLDVNAQ PPPAEDEAEE AAALSSSPNS AASSFQMDLC IYNNRGGSFY KRDSEGEAYD 180 QRASSRASDE DENNGGDASN TRKKLRLSKE QSAFLEESFK EHNTLNPKQK LALAKQLNLR 240 PRQVEVWFQN RRARTKLKQT EVDCEYLKRC CETLTEENRR LHKELQELRA LKTSNPFYMQ 300 LPATTLTMCP SCERVATNST STSSSPSATI NANTGAIKTS NNNNDSPSKA IGFPFGKPRF 360 HPFVHTSQQP HQHQSPAS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MELGLSLGDS SRPLLGFMEK PREASNQLGL GFNTTLSIGP IITRQKDQQH EQEEYEEEET  60
KPKSNNNNIN TRRTRDPNDL SSKPNNNNNP VLHQLDLLPQ LSFPWHPPSE NGSFSSELGG  120
SSRGLDVNAQ PPPAEDEAEE AAALSSSPNS AASSFQMDLC IYNNRGGSFY KRDSEGEAYD  180
QRASSRASDE DENNGGDASN TRKKLRLSKE QSAFLEESFK EHNTLNPKQK LALAKQLNLR  240
PRQVEVWFQN RRARTKLKQT EVDCEYLKRC CETLTEENRR LHKELQELRA LKTSNPFYMQ  300
LPATTLTMCP SCERVATNST STSSSPSATI NANTGAIKTS NNNNDSPSKA IGFPFGKPRF  360
HPFVHTSQQP HQHQSPAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	207	TRKKLRL
2	251	259	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	8e-65	HD-ZIP family protein