PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX66264.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 345aa MW: 38634.3 Da PI: 5.7929

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX66264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	28.2	4.1e-09	61	105	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ + C+ + lC +C +H+ H +vp+ RDX66264.1 61 WICEACERAPAAFLCKADAASLCSSCDADIHSAnplasrHHRVPI 105 79*****************************66899999877775 PP
2	CCT	68.9	1.4e-23	276	318	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea++lRYkeK+ktRkFeKkirY++RKa+Ae+RpR+KGrF+k+ RDX66264.1 276 REARVLRYKEKKKTRKFEKKIRYATRKAYAETRPRIKGRFAKR 318 9****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MLKEGTNMVG GGANNWSRVC NTCQSTACMV YCHADSAYLC SSCDTPVHAT NYVASRPEHV 60 WICEACERAP AAFLCKADAA SLCSSCDADI HSANPLASRH HRVPILPISK PIFEEHEHEE 120 EEEVVDKFED EVEAASWLLP HPMKNNDEEE ENGFLFGDEY LDLLDWNTCG GGHNQFSNVY 180 QHHQQIYNTV PHNYAVVPVQ LPQHFQPSLD FDSSKAGFHY DGSPSQSVSI SSMDIGVVPE 240 STISDISMSH SKSIPIGTRD LFPPLPIPSH LTPLDREARV LRYKEKKKTR KFEKKIRYAT 300 RKAYAETRPR IKGRFAKRID VEAEVDQMLS TALFTEVGGG NFPSF

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MLKEGTNMVG GGANNWSRVC NTCQSTACMV YCHADSAYLC SSCDTPVHAT NYVASRPEHV  60
WICEACERAP AAFLCKADAA SLCSSCDADI HSANPLASRH HRVPILPISK PIFEEHEHEE  120
EEEVVDKFED EVEAASWLLP HPMKNNDEEE ENGFLFGDEY LDLLDWNTCG GGHNQFSNVY  180
QHHQQIYNTV PHNYAVVPVQ LPQHFQPSLD FDSSKAGFHY DGSPSQSVSI SSMDIGVVPE  240
STISDISMSH SKSIPIGTRD LFPPLPIPSH LTPLDREARV LRYKEKKKTR KFEKKIRYAT  300
RKAYAETRPR IKGRFAKRID VEAEVDQMLS TALFTEVGGG NFPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	1e-90	CO-like family protein