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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX66921.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 130aa MW: 14860.1 Da PI: 10.1939 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 19.8 | 2.1e-06 | 64 | 86 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++Cg++Fsr L H+r+H
RDX66921.1 64 HECSICGETFSRGRALGGHMRKH 86
79********************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 130 aa Download sequence |
MKRLREVKEV AQNMMNPQNS PSEELCFECK SCESKFALDG HNTNRKKPKL KDGNGNGKQH 60 AKIHECSICG ETFSRGRALG GHMRKHKDRL LKRSNNTSQN IMFYDLNLTP LQNDLKLLFG 120 ITNPPKLYIS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G37430.1 | 3e-23 | C2H2 family protein | ||||




