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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX66953.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 225aa MW: 24730.4 Da PI: 5.6529 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 58 | 2.4e-18 | 40 | 90 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a++ ++g
RDX66953.1 40 SVYRGVRMRT-WGKWVSEIREPRK---KNRIWLGTFATAEMAARAHDVAALTIKG 90
78*****998.**********854...59*********************99876 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 225 aa Download sequence |
MVEQETETTR NTNATSPSSS SSPSTSKKRG RDNINNNKHS VYRGVRMRTW GKWVSEIREP 60 RKKNRIWLGT FATAEMAARA HDVAALTIKG SSAILNFPEL AASLPRPASN SPRDVQEAAA 120 KAASMEAPPR TPSSPAATPE DLGEIVELPT LGTSFDSPDP NTEFVFLDPN DAWPYSHPWY 180 HGIYDGGYFI GDMNMNCILI LPLFIDDEAS NRNSTHGTYN TASNE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G11590.1 | 1e-54 | ERF family protein | ||||




