PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX67417.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 447aa MW: 49100.6 Da PI: 7.2361

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX67417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	45	66	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++C+k F++ L H+r H RDX67417.1 45 MCHICNKGFRSGKALGGHMRIH 66 7*******************99 PP
2	zf-C2H2	19.8	2.1e-06	98	119	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ CgksFs+ +L H+r+H RDX67417.1 98 TCSLCGKSFSSMKSLFGHMRSH 119 6********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MEEDQEAQHN RENQGSLATG EGEGSEGNGA GEGENLNNNE HHSCMCHICN KGFRSGKALG 60 GHMRIHNLSR KQVHKAKQGT SVAKPKTKKW ELVSGSPTCS LCGKSFSSMK SLFGHMRSHP 120 ERVRRGIQNI TPNKNGAFSN STSSSTLSDD SAVDLSQALR GWSVTAKRGR KSPSCSNANS 180 GLEDDGIEER MQEAVYELML LASGNPKWED GDQIEEKPLN KMGCEDDLLK PVFVNSDDMK 240 NKNRSKRKKG TKKVKLTELE TAEEEGNKLV RCRLCNSSFP CHQALEGHLC SHKNSKNIQV 300 MDESESDHVL VTKEEHHAKG ATMQGDETGI VLGGSAVEAI RGHQCKIFDK NFSTGQVFGD 360 HKRSNWTSRA DAQSAQATSS VENGQNFSKI LSFDLNLPPA MDEEEGVQSD LFIPANIMIS 420 SSYNKYRVLF RVETDIALSA QTISRGQ

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MEEDQEAQHN RENQGSLATG EGEGSEGNGA GEGENLNNNE HHSCMCHICN KGFRSGKALG  60
GHMRIHNLSR KQVHKAKQGT SVAKPKTKKW ELVSGSPTCS LCGKSFSSMK SLFGHMRSHP  120
ERVRRGIQNI TPNKNGAFSN STSSSTLSDD SAVDLSQALR GWSVTAKRGR KSPSCSNANS  180
GLEDDGIEER MQEAVYELML LASGNPKWED GDQIEEKPLN KMGCEDDLLK PVFVNSDDMK  240
NKNRSKRKKG TKKVKLTELE TAEEEGNKLV RCRLCNSSFP CHQALEGHLC SHKNSKNIQV  300
MDESESDHVL VTKEEHHAKG ATMQGDETGI VLGGSAVEAI RGHQCKIFDK NFSTGQVFGD  360
HKRSNWTSRA DAQSAQATSS VENGQNFSKI LSFDLNLPPA MDEEEGVQSD LFIPANIMIS  420
SSYNKYRVLF RVETDIALSA QTISRGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	1e-15	C2H2 family protein