PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX67539.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 360aa MW: 39777.5 Da PI: 7.8592

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX67539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.2	7.5e-41	70	147	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dls+++eyhrrh+vCe+hsk+pvvlv g++qrfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+ RDX67539.1 70 CCSVDGCSSDLSDCREYHRRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQP 147 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDWDGKEFAW DPRGLELANG EGQKNEAASV DLSLGEEKSA PDGSKDSKTV SSPSGSSKRS 60 RLQNGSQNMC CSVDGCSSDL SDCREYHRRH RVCEKHSKTP VVLVGGKQQR FCQQCSRFHS 120 LGEFDEVKRS CRKRLDGHNR RRRKPQPPSL FMAAEKFMYN YKGPRILHFG SPEAYANPIM 180 RNMWPATAKT GAESGYDPPR LLYRIDKHKQ DKGHPLWQEN DPKVGNGNEA MPGTPICQPI 240 HGTVAPSTGG KSSRKLSSDA KPGSFDSGCA LYLLSTLQSQ STELSMVQSS ITCPMQSPSG 300 SVHFDATNEY ACSETAKDKP SGQVLVLDAN TTNLHYNGML QMELDGLVEN EDPLTLPFLW

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDWDGKEFAW DPRGLELANG EGQKNEAASV DLSLGEEKSA PDGSKDSKTV SSPSGSSKRS  60
RLQNGSQNMC CSVDGCSSDL SDCREYHRRH RVCEKHSKTP VVLVGGKQQR FCQQCSRFHS  120
LGEFDEVKRS CRKRLDGHNR RRRKPQPPSL FMAAEKFMYN YKGPRILHFG SPEAYANPIM  180
RNMWPATAKT GAESGYDPPR LLYRIDKHKQ DKGHPLWQEN DPKVGNGNEA MPGTPICQPI  240
HGTVAPSTGG KSSRKLSSDA KPGSFDSGCA LYLLSTLQSQ STELSMVQSS ITCPMQSPSG  300
SVHFDATNEY ACSETAKDKP SGQVLVLDAN TTNLHYNGML QMELDGLVEN EDPLTLPFLW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	145	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-42	SBP family protein