PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68162.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 229aa MW: 25161.7 Da PI: 8.3973

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	113.8	1.1e-35	38	139	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+++rkC +Cv+apyf+++q ++fa+vhk+FGa+nv+k+l+++ ++r++++ sl+yeA+ar+ dP+yG++++i + qqq+++l+ el +++ RDX68162.1 38 PCGACKYMKRKCCVQCVFAPYFASDQgLEQFAIVHKVFGANNVSKMLSNVALDQRHQMVVSLLYEARARLADPIYGCLSTIVSFQQQVASLQRELLMRQ 136 7***********************78*****************************************************************9998 PP DUF260 99 eel 101 ++l RDX68162.1 137 NQL 139 875 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MADQPQEGGD EATSRVINKC IGKGTDKKCA KSRASTPPCG ACKYMKRKCC VQCVFAPYFA 60 SDQGLEQFAI VHKVFGANNV SKMLSNVALD QRHQMVVSLL YEARARLADP IYGCLSTIVS 120 FQQQVASLQR ELLMRQNQLI NSRTSYATLH QSTQQQANNN VAMQPAYSNN SPIPTNLMSF 180 INPGFDHLAM QTASSSHSLE PLQVSGLPQN EEESKIPQVL NNGMAHLIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	2e-51	LBD family protein