PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX68346.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family LBD
Protein Properties Length: 196aa    MW: 22647.8 Da    PI: 8.614
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX68346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260117.96.1e-374101198
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 aCaaCk++r+kC+++C+l+pyfp++++++f +vhk+FG+sn++kl+k+++ee+r+++++sl++eA++r+rdP++G +g ++k+ ++++++  el++ k
  RDX68346.1   4 ACAACKHQRKKCSENCILSPYFPSSRSREFHAVHKVFGVSNITKLVKNAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVLDELKRFK 101
                 7*****************************************************************************************99998766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MHPACAACKH QRKKCSENCI LSPYFPSSRS REFHAVHKVF GVSNITKLVK NAKEEDRRRV  60
VDSLIWEACC RQRDPIHGPY GEYTKVYNEY KKVLDELKRF KGQNQLLQFP PLGLKDLISC  120
NGTKGEHKAE VDSALDYLHG KKNGIIDSDI YNTYCSNYLQ EFQNMRSEVV IPFQQHSQPY  180
YIADLCGFKF VIFSGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.13e-39LBD family protein