PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68398.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 359aa MW: 39366.2 Da PI: 9.547

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	47.9	2.3e-15	205	251	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRd+iN+++ L++l+P++ K +Ka++L ++++Y+k+Lq RDX68398.1 205 VHNQSERRRRDKINERMKALQKLVPNS-----SKTDKASMLDEVIQYMKNLQ 251 6***********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MSQRVPSCDV DHNNKNNNST KTPLLPIPNP MAIEVPMLGC QVGELPYKKG QPSTHEGTAG 60 SSNLATWDKP RASGTLESVV NQRVGVTMDA LVPSLKHGVF KVQESGGTLG ACMPGCSARV 120 PRASITHDFS VSGSDSCRDL SVPFNSASLP SPENTTTSGK QCTRTTANDD RDSISHRSEA 180 RNEDYKTTRV DRSSESNKRI KASAVHNQSE RRRRDKINER MKALQKLVPN SSKTDKASML 240 DEVIQYMKNL QAQLVMMNWM KMYSSMMLPI TMQQQLKMSM MMTQMCIAMG MNKDMVMNMN 300 IPTIPPVLHP TVPTPFMPVA SCGDGLQGAP AKSVTMDAYS KMAALYQQLY HPPASTSKS

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MSQRVPSCDV DHNNKNNNST KTPLLPIPNP MAIEVPMLGC QVGELPYKKG QPSTHEGTAG  60
SSNLATWDKP RASGTLESVV NQRVGVTMDA LVPSLKHGVF KVQESGGTLG ACMPGCSARV  120
PRASITHDFS VSGSDSCRDL SVPFNSASLP SPENTTTSGK QCTRTTANDD RDSISHRSEA  180
RNEDYKTTRV DRSSESNKRI KASAVHNQSE RRRRDKINER MKALQKLVPN SSKTDKASML  240
DEVIQYMKNL QAQLVMMNWM KMYSSMMLPI TMQQQLKMSM MMTQMCIAMG MNKDMVMNMN  300
IPTIPPVLHP TVPTPFMPVA SCGDGLQGAP AKSVTMDAYS KMAALYQQLY HPPASTSKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	215	ERRRRD
2	211	216	RRRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-40	bHLH family protein