PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX68490.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 122aa    MW: 13642.4 Da    PI: 8.7142
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX68490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.99.8e-322878151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss
  RDX68490.1 28 KRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSPRGKLYEFSS 78
                79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MALGSQVCGT EDLSQQKEEM VRGKTQMKRI ENATSRQVTF SKRRNGLLKK AYELSVLCDA  60
EVALIIFSPR GKLYEFSSSR LQVSDVSYVP NSDISWDGER DKENNQGGPS ILILSSSNKF  120
AF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-37MIKC_MADS family protein