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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX68671.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 261aa MW: 29603.8 Da PI: 8.1879 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 59.4 | 8.4e-19 | 128 | 177 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+++AeIrd + ng r++lg+f tae Aa a+++a+++++g
RDX68671.1 128 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFETAEAAALAYDQAALAMRG 177
9*******.**********44465..*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 261 aa Download sequence |
MRLRVVWPPS PQVPLTHVPP INLFFKLGPT NHHMFQKFSA PASGNSNAFI FKTYLPLHYS 60 VFKSSISFPS LYKTEMSSSF FSGDLNYEVP YQYSLPFNEN DSEEMLLYQV LAQGGGENSL 120 ETTTTVSYRG VRRRPWGKFA AEIRDSTRNG VRVWLGTFET AEAAALAYDQ AALAMRGSMA 180 VLNFPAEVVR QSLRNMECGF EEGCSPVLEL KKRHSMKRKL ESKKVKNKSQ NVMVFQDLGA 240 DYLEQLLTLS QDMDMDMDAS Y |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G23240.1 | 8e-56 | ERF family protein | ||||




