PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX68806.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 228aa    MW: 25820.5 Da    PI: 10.0664
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX68806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF657.7e-211865249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +i  ks  qvtfskRr g++KKA+EL++LC++e+a+++fs+ +k + +
  RDX68806.1 18 KIPKKSHLQVTFSKRRSGLFKKASELCTLCGVEIAIVVFSPADKAFSF 65
                57789999*********************************9987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MSKNKKSSLG RQKIPIEKIP KKSHLQVTFS KRRSGLFKKA SELCTLCGVE IAIVVFSPAD  60
KAFSFGHPEV ESLIDRYTTR NPPQESSAHH LVEAHRNANV RDLNMQLTQV FNHLEMEKKR  120
GEDLDHVRKA RQRQFWWESP ADELGLHELL QLKVSIEELK KNIEKHASKF MLEHSANMSS  180
SSSILPHNNG LGPSLGRYDA FDNKSAPGIT IAAPLPNAHY LAFRTSYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-57M-type_MADS family protein