PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68989.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 144aa MW: 16980.7 Da PI: 9.5597

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	83.1	1.7e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRr g+lKK +ELSvLCda++ +iifsstgk+ ++++ RDX68989.1 9 KRIENTTTRQVTFSKRRGGLLKKTKELSVLCDAQIGLIIFSSTGKMWDWCT 59 79***********************************************96 PP
2	K-box	36.6	1.9e-13	82	143	10	71
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKne 71 ++ e+l +++a L++e+ L+ + ++lGed++ L+++++ +Leq+Le+sl k+R+++++ RDX68989.1 82 RDHPREELFHDMAMLRQETLRLELGIQRYLGEDMGCLQYEDMTKLEQELENSLAKVRNRQKK 143 455567888999***********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
MGRGKIEIKR IENTTTRQVT FSKRRGGLLK KTKELSVLCD AQIGLIIFSS TGKMWDWCTE 60 PFRMEQIIEK YQRSTGARIP ERDHPREELF HDMAMLRQET LRLELGIQRY LGEDMGCLQY 120 EDMTKLEQEL ENSLAKVRNR QKKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23260.3	9e-52	MIKC_MADS family protein