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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX69259.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | bHLH | ||||||||
| Protein Properties | Length: 334aa MW: 37685.1 Da PI: 6.2921 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 38.5 | 2.1e-12 | 163 | 208 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h ++ErrRR+++ ++f L +P + K +Ka++L+ A++Y+k+L+
RDX69259.1 163 HIMAERRRRQELTERFMALSATIPGL-----NKTDKASVLRAAIDYVKQLK 208
999**********************8.....6*****************95 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 334 aa Download sequence |
MFDEKVTRPI IIITITITLT PAHRITLLTS MEDSWENWHL HMEMDCENDD EFLRDILQQP 60 LQCFSSESES DHSFHASSAD DAVLSLIKTN SINASKRPRR LSSPRTYILS FDNSTLMPIT 120 PEPCPPSSSL PAKRALETQG PEPTTTPNHG PKKTRTSSQT IDHIMAERRR RQELTERFMA 180 LSATIPGLNK TDKASVLRAA IDYVKQLKER VQELEKQEKK RSVESVVFMK KPTTSCETSC 240 SILPEMEARV LGKEVLVEVH CEKENGIELK ILDHLENLHL SVTGSSVLPF GNSALCITIT 300 AQMGDAYKMP VDDLLKNLRQ VLTKSHVLFD SDPY |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G37850.1 | 9e-43 | bHLH family protein | ||||




