PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX70034.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 307aa    MW: 35267.5 Da    PI: 4.6908
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX70034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.2e-1977130356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 k+++++ +q+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  RDX70034.1  77 KKRRLSVDQVKALEKNFEVENKLEPERKLKLAQELGLQPRQVAVWFQNRRARWK 130
                 566899***********************************************9 PP
2HD-ZIP_I/II129.31.5e-4176168193
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ekkrrls +qvk+LE++Fe e+kLeperK +la+eLglqprqvavWFqnrRAR+ktkqlE+dy  Lk+++dalk + ++L++++e+Lr+++ke
   RDX70034.1  76 EKKRRLSVDQVKALEKNFEVENKLEPERKLKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANFDALKVNYDTLNQDNEALRNQIKE 168
                  69****************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MEISGTCIAA YKTIPSFLLM KRLGSSDSST PLIKISPPTE EHSPRKRQHM YGREFESMLE  60
EVDEEGCVEE AGHPSEKKRR LSVDQVKALE KNFEVENKLE PERKLKLAQE LGLQPRQVAV  120
WFQNRRARWK TKQLERDYGL LKANFDALKV NYDTLNQDNE ALRNQIKELK SRLEEEKTVS  180
VVPESEEKTS EPCSESEDQL NYECLNKSDC VGGAWVFKDG SSDSDSSAME NNRDSPKGVM  240
KSSCGVIETE SWMNCLQLQK AAYQWQNVKM EEHNLLSADE ACNFFSDEQP PTLQWYCPDQ  300
WSCAQFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
177106KKRRLSVDQVKALEKNFEVENKLEPERKLK
2125133RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.12e-69HD-ZIP family protein