PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX70216.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 189aa    MW: 21846 Da    PI: 10.2859
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX70216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.13.5e-212267449
                -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                ++   rqvtfskRr+g++KKA+ELS+LC+aev +++fs+ +k y +
  RDX70216.1 22 KDPNTRQVTFSKRRTGLFKKANELSILCGAEVGIVVFSPGDKPYSF 67
                66778**********************************9887766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MPTNHRCERI MGRRKIEIAE VKDPNTRQVT FSKRRTGLFK KANELSILCG AEVGIVVFSP  60
GDKPYSFGHP SVEVVADKFL QQNVTQRSGV QASDEVSDID RLNQQLSDVQ AQIRQEEKKG  120
AELHERFKQH QLAQLSRYKE LQGSYLEIQR KVKDYLDAIE VSESMMLLAQ EPVVRITKHV  180
TTKRRRRRN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175188RITKHVTTKRRRRR
2183188KRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.11e-35M-type_MADS family protein