PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX70549.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 167aa    MW: 19580.5 Da    PI: 9.5847
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX70549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF100.85.2e-32959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  RDX70549.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                79***********************************************96 PP
2K-box72.61.2e-2481154780
       K-box   7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieel 80 
                  ++ e ++++ +qe+ kLk+++e Lq++qR+llGe+Le L++k+L+qLe+qL++slk+iRs K  ++++++ + 
  RDX70549.1  81 HHQPEVETQRRYQEYLKLKSRVEALQQTQRNLLGEELEHLDIKDLEQLERQLDSSLKQIRSNKVCIFVNELTNH 154
                 55778899*********************************************************999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSG  60
PSMAKSLERY HRCSYGALEV HHQPEVETQR RYQEYLKLKS RVEALQQTQR NLLGEELEHL  120
DIKDLEQLER QLDSSLKQIR SNKVCIFVNE LTNHIYRNNQ VTSTITI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.17e-75MIKC_MADS family protein