PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX70712.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 284aa MW: 30725.7 Da PI: 9.2175

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX70712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.2	1.2e-37	32	177	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ ++++ + RDX70712.1 32 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSDHKPLL-----Ppptpfilgkrir 125 78**************************************************************99999776222222211.....1222333344444 PP TCP 89 ...................................................k 89 + RDX70712.1 126 pdddavskddavslvapptppalwtlpprpdfgqvwsfaaaappelvsvspQ 177 4444444555555566666666666666666666665544444444444332 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MSNSDGPTNG VTTNNEAAIV ESQRTTPSTA LAVKKPPSKD RHSKVDGRGR RIRMPIICAA 60 RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTTPA SFSTVSDHKP LLPPPTPFIL 120 GKRIRPDDDA VSKDDAVSLV APPTPPALWT LPPRPDFGQV WSFAAAAPPE LVSVSPQNSM 180 FHHHQHHHQQ QHQQQVAMGE ASAARLGNYL PGHLNLLASL SGGHGNSARR DDEPLLSGEV 240 HELRNSIGLV FSWFGKLIRW IIGGKGQVPI IDGVPEITQR SETS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	6e-60	TCP family protein