PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX70875.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family Trihelix
Protein Properties Length: 656aa    MW: 72670.9 Da    PI: 5.4056
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX70875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.49.7e-2963146186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW++qe+laL+++r++m+ ++r+++ k+plW+evs+k++e g++r++k+Ckek+en+ k++k++keg++++++++  t+++fdql+
  RDX70875.1  63 RWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGK--TYRFFDQLQ 146
                 8********************************************************************975544..6******98 PP
2trihelix102.24.1e-32478563187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW+k ev+aLi++r+++e++++++  k+plWee+s+ m++ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea
  RDX70875.1 478 RWPKVEVQALINLRTSLEKKYQESGPKGPLWEEISALMKKMGYNRNSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 563
                 8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 656 aa     Download sequence    
MLGDSAVLGT GGGGSGDAVA AAAAASGGAH DGADGGGGGG GSNSGDDERG RVEEGDRSFG  60
GNRWPRQETL ALLKIRSDMD VAFRDASVKG PLWDEVSRKL AELGYHRNAK KCKEKFENVY  120
KYHKRTKEGR SGKSEGKTYR FFDQLQALEN NPSIQSPTSK PPQTTALPAT PVSMVVTTTH  180
SSIMPLVPPT TTVPLLPVSN NTTVPSTTTL PMPQGILNIT PPSTLNITTP SYPSSNPTYF  240
PTQTPNPTSN NNNNNPPNTI TPPSFPNIPT DLLSNSSSSS TSSEGTMEGG GTRRKRKRKW  300
KDFFERLMKE VIEKQEELQR RFLEAIEKRE QERVVREEAW RTQEMLRINR EREILAQERS  360
IAAAKDAAVM AFLQKIAEHQ QQEINLEPAL NNSNNNNAIV PPVAQATTAP TPAPAPQQTQ  420
ATTVPETPQA QPLVPQAQPL QQQHQLQQQQ QVVTNVEINK ADDNNGENLM MGGASSSRWP  480
KVEVQALINL RTSLEKKYQE SGPKGPLWEE ISALMKKMGY NRNSKRCKEK WENINKYFKK  540
VKESNKKRPE DSKTCPYFHQ LEALYREKNK VENQMKPESM MAPLMVQPEQ QWPPQHVVVP  600
PEVTMGDASN DPMDRQHHEE DDDEEDDKEI MDEDEDDDDD GGGNYEIVAS KPASAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1293298RRKRKR
2293299RRKRKRK
3294299RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-53Trihelix family protein