PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX70917.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 185aa MW: 21013 Da PI: 9.9495

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX70917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	29.3	1.5e-09	30	53	2	26
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ktelCr+f+r G C G++C +aH+ RDX70917.1 30 KTELCRRFRR-GVCGLGSKCDYAHS 53 8*******.***********8 PP
2	zf-CCCH	24.5	4.8e-08	62	84	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 +lCr f+++ +C+yG +C++ H+ RDX70917.1 62 KLCRLFLQNKHCPYGRTCRYLHS 84 69********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MEAGEAWSFP QSKESETGFN NHYRRNLMVK TELCRRFRRG VCGLGSKCDY AHSVAELRRH 60 PKLCRLFLQN KHCPYGRTCR YLHSTTIIPP LPIPPPPPPP PELGKLDGYS SVEYKRMQTS 120 AAAVPSDGYT SPEHRIMQTS TATTNASTST VATSSLHKNE PSYPVKFIFK KNQLQKINRI 180 YADWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68200.2	2e-11	C3H family protein