PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX71175.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 346aa MW: 38951.6 Da PI: 7.7924

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX71175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	187	206	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + Cp C k+F+r n++ H+ RDX71175.1 187 FACPLCFKTFNRYNNMQMHM 206 78*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
LIIYPFFPPL IMTNSYSSND LNFWLDLNSP CLLSSPSSSS PPSINPPFYF PSSYHNNYTS 60 GISSTHFFQP SPPQRKALPL LHPRHDDDEE DLESSFSAME VDKKKKEQST SSSCLDEEDA 120 VTVALHLGLP STSESADLAS SSLYSTEASD KEEKLSGASS GLLSNRINRG QYWIPTSAQI 180 LIGPTQFACP LCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTAMLR LPCYCCAPGC 240 KNNIDHPRAK PLKDFRTLQT HYKRKHGTKP FVCRKCCKTF AVRGDWRTHE KNCGKRWYCS 300 CGSDFKHKRS LKDHIKAFGY GHAAYGNDCN LDQDDDQAGS EIEQES

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

LIIYPFFPPL IMTNSYSSND LNFWLDLNSP CLLSSPSSSS PPSINPPFYF PSSYHNNYTS  60
GISSTHFFQP SPPQRKALPL LHPRHDDDEE DLESSFSAME VDKKKKEQST SSSCLDEEDA  120
VTVALHLGLP STSESADLAS SSLYSTEASD KEEKLSGASS GLLSNRINRG QYWIPTSAQI  180
LIGPTQFACP LCFKTFNRYN NMQMHMWGHG SQYRKGPESL RGTQPTAMLR LPCYCCAPGC  240
KNNIDHPRAK PLKDFRTLQT HYKRKHGTKP FVCRKCCKTF AVRGDWRTHE KNCGKRWYCS  300
CGSDFKHKRS LKDHIKAFGY GHAAYGNDCN LDQDDDQAGS EIEQES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-117	C2H2 family protein