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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX71372.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 255aa MW: 28656.7 Da PI: 6.6642 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 56.5 | 6.6e-18 | 82 | 132 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y GVr ++ +g+++AeIrd + ng +r++lg+f++ae Aa a+++a+ +++g+
RDX71372.1 82 YIGVRKRP-WGKFAAEIRDTTRNG--ARVWLGTFDSAEAAALAYDQAAFSMRGH 132
89******.**********54465..**************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 255 aa Download sequence |
MTKRQKIVAY RMTSPFFQNP DWDMLHQSSE ILFDSLSSNA LLDPLHDSLS FDMVDFSMEP 60 TEGNNNNELV VKSEVQNKER SYIGVRKRPW GKFAAEIRDT TRNGARVWLG TFDSAEAAAL 120 AYDQAAFSMR GHNAVLNFPV KTVKESLQDF QYSCCNGSSP ALALKERHCI QRKLSSKAKK 180 CKGKETSSEA ATPSVMVLED LGIDYLEQLL SISDQSFALN CSESILALNI VLHPAQVQFF 240 TILEQYLPIK ILKTC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G23240.1 | 5e-39 | ERF family protein | ||||




