![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | RDX71551.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
| Family | GATA | ||||||||
| Protein Properties | Length: 127aa MW: 14736.9 Da PI: 9.1949 | ||||||||
| Description | GATA family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GATA | 40.9 | 2.9e-13 | 1 | 27 | 9 | 35 |
GATA 9 TplWRrgpdgnktLCnaCGlyyrkkgl 35
TplWR+gp+ ++ LCnaCG +y++kg+
RDX71551.1 1 TPLWRNGPSEKPVLCNACGSRYKLKGH 27
9********9999************97 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 127 aa Download sequence |
TPLWRNGPSE KPVLCNACGS RYKLKGHLDN YLPKNFQLHS HNNNYFKNIP PTDDIISEFW 60 NKIPTRKRSL ERITAMQKFQ KELLSLYRCE RQPNESSPEE ILLVDKVNNF IPSNEIGLGA 120 ILLKTDP |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G17570.2 | 8e-14 | GATA family protein | ||||




