PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX72607.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 641aa MW: 71022.9 Da PI: 6.8402

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX72607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.1	3.2e-13	72	118	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riNs +++Lr+++P a K++Ka+ L ++++++k+L RDX72607.1 72 KSHSEAERRRRARINSHLDTLRSVIPGA-----NKMDKAALLGEVIRHLKEL 118 58***********************8.....6**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MEMEAFVWGD GIDGDAPMRS SDGFEGNNGV IGSGCGSSFS LVLDRERGEL VEAPVKLERK 60 GVSTERSIQA LKSHSEAERR RRARINSHLD TLRSVIPGAN KMDKAALLGE VIRHLKELKK 120 NAAQACEGLM IPKDNDEISV EEQEGGLNGF PYSIRASLCC EYKPGLLSDI RQALDALHLM 180 ITRADIATLE GRMKNVFVII SCKEQNFEDA AYRQFLAGSV HQALRSVLNR FSVSQDILGT 240 RKRRRISIFS SSSLDDFLFE CETQRNSENM ALSSPLQNLS AVISASGNAA VTARPPRWRH 300 WAVNAAASDT STGASVQLGG YEEGKLERPK WAGETPLSRL VKALISFKPF YSLLKIGARR 360 ALISTAEKNN IPWRAMAKEI LESEVYGEMD TIQNKSLVYP DYYLNPFHAY DEGNLTWLAA 420 AEAEAATMSM ARRALPDASS IQEANQILRG NWLRAIEQHH IQYSKSSRID DILDIGCSVG 480 ISTGYLADKF PTAKVTGLDL SPYFLAVAQH KEKRAVPRNL PIRWIHANGE DTGLPSKSFD 540 LVSFAFVLHE CPTRVIVNLA REAFRLLRPG GTLALIDFSL KSKVLQELSP VLFTLVKSTE 600 PFLDEYYLTD LDETLREAGF VNITSILTDP RHVTITATVP Q

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MEMEAFVWGD GIDGDAPMRS SDGFEGNNGV IGSGCGSSFS LVLDRERGEL VEAPVKLERK  60
GVSTERSIQA LKSHSEAERR RRARINSHLD TLRSVIPGAN KMDKAALLGE VIRHLKELKK  120
NAAQACEGLM IPKDNDEISV EEQEGGLNGF PYSIRASLCC EYKPGLLSDI RQALDALHLM  180
ITRADIATLE GRMKNVFVII SCKEQNFEDA AYRQFLAGSV HQALRSVLNR FSVSQDILGT  240
RKRRRISIFS SSSLDDFLFE CETQRNSENM ALSSPLQNLS AVISASGNAA VTARPPRWRH  300
WAVNAAASDT STGASVQLGG YEEGKLERPK WAGETPLSRL VKALISFKPF YSLLKIGARR  360
ALISTAEKNN IPWRAMAKEI LESEVYGEMD TIQNKSLVYP DYYLNPFHAY DEGNLTWLAA  420
AEAEAATMSM ARRALPDASS IQEANQILRG NWLRAIEQHH IQYSKSSRID DILDIGCSVG  480
ISTGYLADKF PTAKVTGLDL SPYFLAVAQH KEKRAVPRNL PIRWIHANGE DTGLPSKSFD  540
LVSFAFVLHE CPTRVIVNLA REAFRLLRPG GTLALIDFSL KSKVLQELSP VLFTLVKSTE  600
PFLDEYYLTD LDETLREAGF VNITSILTDP RHVTITATVP Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	245	RKRRR
2	242	246	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	3e-28	bHLH family protein