PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX72812.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 495aa MW: 54540.6 Da PI: 6.3001

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX72812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	22.9	1.5e-07	321	341	5	26
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C++f++ G C++Gd C +aHg RDX72812.1 321 PCPDFRK-GACRRGDMCEYAHG 341 8****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MEKEEEEALL LAPLFSRFEP ELRLKPVLSP TLFVILISAS QPRSHMMNHL TIETEDSLAS 60 LLELAANNDV EGFKRMIERD PSCVDEVGLW YSRQKGSRRM VNEFRTPLMV AATYGSIDVL 120 DLILSLSGCD INKPCGLDKS TALHCAASGG AENAVDVVML LLAAGADPNS VDGNGHRPVD 180 VIVVPPKHES VRSSLEAVLQ TNDSIAVCNL RVITAPSNAY SPPLSTSPEN GSPSAPDFQL 240 KSKLNEGFVS SASEKKEYPV DPSLPDIKNS IYSTDEFRMY SFKVRPCSRA YSHDWTECPF 300 VHPGENARRR DPRKYHYSCV PCPDFRKGAC RRGDMCEYAH GVFECWLHPA QYRTRLCKDG 360 TSCSRRVCFF AHTAEELRPL YVSTGSAVPS PRSSTSSAMD FAAAMNMLPG SPSSMSVMSP 420 SPFTPPMSPS ANGMSHSSVG WSQPNVPALH LPGSNLHSSR LRSSFNARDI PADDFDLLHD 480 YDVQQQHQQQ QQLLN

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MEKEEEEALL LAPLFSRFEP ELRLKPVLSP TLFVILISAS QPRSHMMNHL TIETEDSLAS  60
LLELAANNDV EGFKRMIERD PSCVDEVGLW YSRQKGSRRM VNEFRTPLMV AATYGSIDVL  120
DLILSLSGCD INKPCGLDKS TALHCAASGG AENAVDVVML LLAAGADPNS VDGNGHRPVD  180
VIVVPPKHES VRSSLEAVLQ TNDSIAVCNL RVITAPSNAY SPPLSTSPEN GSPSAPDFQL  240
KSKLNEGFVS SASEKKEYPV DPSLPDIKNS IYSTDEFRMY SFKVRPCSRA YSHDWTECPF  300
VHPGENARRR DPRKYHYSCV PCPDFRKGAC RRGDMCEYAH GVFECWLHPA QYRTRLCKDG  360
TSCSRRVCFF AHTAEELRPL YVSTGSAVPS PRSSTSSAMD FAAAMNMLPG SPSSMSVMSP  420
SPFTPPMSPS ANGMSHSSVG WSQPNVPALH LPGSNLHSSR LRSSFNARDI PADDFDLLHD  480
YDVQQQHQQQ QQLLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41900.1	0.0	C3H family protein