PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX73573.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 523aa MW: 58970.4 Da PI: 6.9229

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX73573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl RDX73573.1 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ RDX73573.1 67 RGRFTPEEEKLIISLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS 120 VTSSITTTQS VDQTQYNYNS NQLDHFVNQE NITAKPPVQE TLFSSTCPLF MFDTSSLDQE 180 TTTIDTNVRA ELFHDSLGLS TEMWNLSRHQ VHAFPPQPAV TFSAVMDTTN YLPPLIENMV 240 PNIEVQSCSI DEEGEMALEC LRRQELNEWV ENQQECPSSF LFWDNVEGQL GGEELAPNTS 300 NMGTNTLSPF PSSLASYVAV CTVATMIIPE KNRREICKYL FQEGVCYAKK DFNLAKHPDI 360 DVPNLQVIKL MQSFKSREYV RETFAWMHYY WFLTNDGIEF LRTYLNLPSE IVPATLKKQA 420 KPAGRPFGGP PGDRPRGPPR FDGERRFGGD RDGYRGGPRG PGGDFGDKGG APADYRPSFG 480 GPGGRPGFGR GAGGYGAPTT LKRTISSFAK SCDELEIGES DRV

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY  60
LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS  120
VTSSITTTQS VDQTQYNYNS NQLDHFVNQE NITAKPPVQE TLFSSTCPLF MFDTSSLDQE  180
TTTIDTNVRA ELFHDSLGLS TEMWNLSRHQ VHAFPPQPAV TFSAVMDTTN YLPPLIENMV  240
PNIEVQSCSI DEEGEMALEC LRRQELNEWV ENQQECPSSF LFWDNVEGQL GGEELAPNTS  300
NMGTNTLSPF PSSLASYVAV CTVATMIIPE KNRREICKYL FQEGVCYAKK DFNLAKHPDI  360
DVPNLQVIKL MQSFKSREYV RETFAWMHYY WFLTNDGIEF LRTYLNLPSE IVPATLKKQA  420
KPAGRPFGGP PGDRPRGPPR FDGERRFGGD RDGYRGGPRG PGGDFGDKGG APADYRPSFG  480
GPGGRPGFGR GAGGYGAPTT LKRTISSFAK SCDELEIGES DRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	5e-98	MYB family protein