PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX73796.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 227aa MW: 25954.3 Da PI: 6.0972

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX73796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.7	1.8e-15	24	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEde l+ +v +G g+W+ + + g+ R++k+c++rw ++l RDX73796.1 24 KGPWTREEDEVLASYVSIHGVGNWNIVQKNTGLARCGKSCRLRWTNHL 71 79*******************************************996 PP
2	Myb_DNA-binding	46.3	9.5e-15	77	120	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ eE+ + +++++ lG++ W++ a++++ gRt++++k++w++ RDX73796.1 77 RGAFSDEEQRKVIELHASLGSK-WAKMAQELP-GRTDNEIKNFWNT 120 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MCTLPHGGEN SDKDQAVEES GFKKGPWTRE EDEVLASYVS IHGVGNWNIV QKNTGLARCG 60 KSCRLRWTNH LRPDLKRGAF SDEEQRKVIE LHASLGSKWA KMAQELPGRT DNEIKNFWNT 120 RLKKRRRLGL PVYPDDIKPM LNDSEAFPLP ELIFDDCNFD LERETLCMPS TSFGPENSIF 180 EQQISDNPIM HHPKPISIVP ENSIFEQQIS DNPIMHHPKP ISIVPEN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	128	LKKRRRL
2	124	128	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26960.1	2e-64	MYB family protein