PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX74387.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 353aa MW: 40002.4 Da PI: 8.4395

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX74387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	64.3	1.3e-20	26	70	1	45
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 kr en+ rq t++kR+ngi+KKA ELS+LCd+++ +++f+++gk RDX74387.1 26 KRLENTNGRQATYAKRKNGIMKKAAELSILCDIDIILLMFAPNGK 70 689****************************************97 PP
2	HLH	11.8	0.00045	75	112	10	49
HHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPk.askapskKlsKaeiLekAve 49 r RR+++ + +++ +l P+ + ++Kl+ e L+k+ + RDX74387.1 75 RGRRSNLEEVIAKFAQLTPQeR---AKRKLETLEALKKTFK 112 99****************66...8888******9865 PP
3	K-box	13.8	2.4e-06	127	187	17	71
K-box 17 lqqelakLkkeienLq.....reqRhllGedLesLs.lkeLqqLeqqLekslkkiRskKne 71 ++q ++ L ++ + Lq + +R + + +++s +++L q+e+ L +sl++iR++K + RDX74387.1 127 SSQTIEDLSNQARLLQteiseTHKRLSHWTEFDKISsVEQLGQMENSLRESLNQIRTRKFN 187 5677777777777777666533445567899999863688*******************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MIKVTVVVNY IIYLMRRMGR VKLKIKRLEN TNGRQATYAK RKNGIMKKAA ELSILCDIDI 60 ILLMFAPNGK PSICRGRRSN LEEVIAKFAQ LTPQERAKRK LETLEALKKT FKKLDHDVNI 120 QEFLGTSSQT IEDLSNQARL LQTEISETHK RLSHWTEFDK ISSVEQLGQM ENSLRESLNQ 180 IRTRKFNEMN IPFRMSAEQH LQPLSWIANG DSQNIVLPEE SSMFLHKDVE GSASSSFGSY 240 ASYLGSSIKT EMSNSGQENG VLSEMSSAAP MRLQLNGQFP YLPYNFNLLN NLKFQPTAEI 300 NPHENPVDYH VNGSFEAPRS GYDSNHHGWA STSGHCGVTM FDEQLYAQAS STE

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MIKVTVVVNY IIYLMRRMGR VKLKIKRLEN TNGRQATYAK RKNGIMKKAA ELSILCDIDI  60
ILLMFAPNGK PSICRGRRSN LEEVIAKFAQ LTPQERAKRK LETLEALKKT FKKLDHDVNI  120
QEFLGTSSQT IEDLSNQARL LQTEISETHK RLSHWTEFDK ISSVEQLGQM ENSLRESLNQ  180
IRTRKFNEMN IPFRMSAEQH LQPLSWIANG DSQNIVLPEE SSMFLHKDVE GSASSSFGSY  240
ASYLGSSIKT EMSNSGQENG VLSEMSSAAP MRLQLNGQFP YLPYNFNLLN NLKFQPTAEI  300
NPHENPVDYH VNGSFEAPRS GYDSNHHGWA STSGHCGVTM FDEQLYAQAS STE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03060.2	2e-84	M-type_MADS family protein