PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX75017.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 165aa MW: 18478.1 Da PI: 6.0829

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX75017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	142.8	1.1e-44	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+C+kdC++apyfp+++p+kfa vhk+FGasnv+k+l++lp+++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q+++l+ +la++++ RDX75017.1 6 PCASCKLLRRRCSKDCIFAPYFPSNDPQKFALVHKVFGASNVSKMLQELPTQQRADAVSSLVYEAHARVRDPVYGCVGAISYLQNQVSELQMQLAVAQA 104 7**********************************************************************************************9998 PP DUF260 100 e 100 e RDX75017.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MAGNSPCASC KLLRRRCSKD CIFAPYFPSN DPQKFALVHK VFGASNVSKM LQELPTQQRA 60 DAVSSLVYEA HARVRDPVYG CVGAISYLQN QVSELQMQLA VAQAEILCIQ MQQEPVMPNP 120 QMEDPDHKSY ILQNDLPQYL NYASSTNVIY DSLSRESIFG HDMVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	5e-74	LBD family protein