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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX75349.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ARR-B | ||||||||
| Protein Properties | Length: 691aa MW: 75444.3 Da PI: 5.1496 | ||||||||
| Description | ARR-B family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | G2-like | 91.7 | 6.1e-29 | 211 | 264 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr++W+ eLH++Fv av+qL G +kA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
RDX75349.1 211 KPRVVWSVELHRKFVAAVNQL-GLDKAVPKKILDLMNVEGLTRENVASHLQKYRL 264
79*******************.********************************8 PP
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| 2 | Myb_DNA-binding | 41.1 | 4.2e-13 | 213 | 263 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48
r W+ e++ ++v av+qlG + +k+I m+ +g+t++++ s++qky+
RDX75349.1 213 RVVWSVELHRKFVAAVNQLGLDkaVPKKILDLMNvEGLTRENVASHLQKYR 263
678***********************************************7 PP
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| 3 | Response_reg | 84.8 | 2.6e-28 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95
vl vdD+p+ +++l+++l+k +y +v+++ ++ eal++l++++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ +++ + + Ga
RDX75349.1 26 VLAVDDDPICLKVLENLLRKCQY-QVTTTNQAVEALKMLRDNRnkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTKLVMNGITHGAC 120
799********************.***************888888*******************87754.558************************ PP
EEEESS--HHHHHH CS
Response_reg 96 dflsKpfdpeelvk 109
d+l Kp+ +eel +
RDX75349.1 121 DYLLKPVRIEELKN 134
***********987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 691 aa Download sequence |
MAVENQRGNL GNEDGGSDPF PVGMRVLAVD DDPICLKVLE NLLRKCQYQV TTTNQAVEAL 60 KMLRDNRNKF DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTKL VMNGITHGAC 120 DYLLKPVRIE ELKNIWQHVV RRKNFDCKDQ NKASNEEKAP NIAGEGSQGL RSENSTDQNR 180 RVGKKRKDQS EEEEEDEEGN EDDEDPSAQK KPRVVWSVEL HRKFVAAVNQ LGLDKAVPKK 240 ILDLMNVEGL TRENVASHLQ KYRLYLKKAA QQANMVAALG GSDSYLRMGS IEGFGDFCTS 300 SGSGRISSST LPSYATSGIF GRLNSPAGLN MRGINSSTLI RPVQSQNING SLNTLGNIPP 360 SMFPANQSSS LLQGIPTSVE LNQSKQSNCT TGISQLNQID SSGFTVASGF PDSRTPVNGA 420 NNSLPCVSSN HIMLQGNPQQ THSPGAFRNQ SSVRAASLSA DSFDVGMCGS SNLLDYNRCN 480 ENWQSAAQLS KFSANSLPCE AFPTSINVSN SSTHIGNSPV DFSPRIAIPV SLEDARNELR 540 CQEGLMGNII QPSSYTPQQR WEEHKLDYNQ NMSRPFNPGN SHASSSSVGL GLNQNNTICS 600 NRVDASLVGQ LNGASPSISR CTEVEKFSSD IRLKSNEAYI LEQMKSQDGF MQNTFGTLDD 660 IMGAMVKREQ NELTLLDGEM GFDAYPVGSC N |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G25180.1 | 1e-124 | ARR-B family protein | ||||




