PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX75431.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 359aa MW: 39426.9 Da PI: 6.3562

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX75431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.3	5.5e-07	12	50	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.....H 37 r+C+++ + + +lfC+ + +lC+ C H H RDX75431.1 12 RTCDTCRSAPSTLFCRAHSAYLCAACDARLHPAaaaswH 50 79************************9988833455555 PP
2	zf-B_box	27.9	4.7e-09	53	96	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 ++C+ +e+ ++ + C+ + lC +C +H+ H ++ RDX75431.1 53 VWVCEACERAPAAFLCKADAASLCSSCDADIHSAnplagrHHRI 96 689*****************************668899996555 PP
3	CCT	70.5	4.3e-24	285	328	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ RDX75431.1 285 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 328 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MLEAEATATW ARTCDTCRSA PSTLFCRAHS AYLCAACDAR LHPAAAASWH ERVWVCEACE 60 RAPAAFLCKA DAASLCSSCD ADIHSANPLA GRHHRIPVLP ISGAGPHADV ADDDDDAADV 120 DDEDETASWL LLNPLKSGGV PNNNNNNGFL YSGEVDEYLD LVDNCNSCGD NNHFTATATT 180 TDHYTQHQHF GDVSHQKSYA GDSVVPVQHH HHFQLGLDFD NSKPAFSYNG SVSQSVSVSS 240 MDVGIVPEST MRDVSIGLSR PPKGTIDLFS GPPIQMPSHL TPMDREARVL RYREKKKTRK 300 FEKTIRYASR KAYAETRPRI KGRFAKRTDV EAEVDQMFST TLITEVGYGI IIWTGKRRA

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MLEAEATATW ARTCDTCRSA PSTLFCRAHS AYLCAACDAR LHPAAAASWH ERVWVCEACE  60
RAPAAFLCKA DAASLCSSCD ADIHSANPLA GRHHRIPVLP ISGAGPHADV ADDDDDAADV  120
DDEDETASWL LLNPLKSGGV PNNNNNNGFL YSGEVDEYLD LVDNCNSCGD NNHFTATATT  180
TDHYTQHQHF GDVSHQKSYA GDSVVPVQHH HHFQLGLDFD NSKPAFSYNG SVSQSVSVSS  240
MDVGIVPEST MRDVSIGLSR PPKGTIDLFS GPPIQMPSHL TPMDREARVL RYREKKKTRK  300
FEKTIRYASR KAYAETRPRI KGRFAKRTDV EAEVDQMFST TLITEVGYGI IIWTGKRRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	8e-85	CO-like family protein