PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX75762.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 551aa MW: 59991.1 Da PI: 10.1395

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX75762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.9	1.3e-36	211	326	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg......... 88 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el++++ +++ + ++++++ +++++ + RDX75762.1 211 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPPWNPTVTsmqQQQQEQIVHGENN-Kspavddsmi 308 79**************************************************************333332222221111111111222.1345555555 PP TCP 89 .................k 89 RDX75762.1 309 afgsrgeslttlaaaagG 326 565555555555433331 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MAGTFGRSRG SRSKFQSGGS CTSNNKRRVR VARNKAGSAR NQQPTRDKCK ASLKAGRGKP 60 QQGSDSGSSQ ELSSSSSSAT SSSSSKSDSK FKTCDRGRRR RPTLPPISSS SPLQHHHHHQ 120 QHQQQQIEQQ SYTGLDTELL NPLQPSKKRS RLPPLPPPPP PSSLSPTEHA RKMGESIHHH 180 HHQAAAPSRA AMRGGGGEIV EVQGGHIVRS TGRKDRHSKV CTAKGPRDRR VRLAAHTAIQ 240 FYDVQDRLGY DRPSKAVDWL IKKAKAAIDE LAELPPWNPT VTSMQQQQQE QIVHGENNKS 300 PAVDDSMIAF GSRGESLTTL AAAAGGRAPE QFSHQQLDQS ENANNIGNKY NTGSGFLPPS 360 LDSDNIAETI KSFFPVEATT TSFQNYPPPP PDLRQQDLRL SLQSFQDPIM LHHQPQSHHE 420 PVLFAGTALG FDGGSGWSEQ QQQQHSEEQR FLYAGNSGHG GGFVFNSPAP AFGQFFSQRG 480 PLQSSNTPSV RAWIDPSVDH HPHPHHHYLS QLIHQGSVAG GGGFPVAGGF SGFHIPARIQ 540 GEEEHDGVSD K

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MAGTFGRSRG SRSKFQSGGS CTSNNKRRVR VARNKAGSAR NQQPTRDKCK ASLKAGRGKP  60
QQGSDSGSSQ ELSSSSSSAT SSSSSKSDSK FKTCDRGRRR RPTLPPISSS SPLQHHHHHQ  120
QHQQQQIEQQ SYTGLDTELL NPLQPSKKRS RLPPLPPPPP PSSLSPTEHA RKMGESIHHH  180
HHQAAAPSRA AMRGGGGEIV EVQGGHIVRS TGRKDRHSKV CTAKGPRDRR VRLAAHTAIQ  240
FYDVQDRLGY DRPSKAVDWL IKKAKAAIDE LAELPPWNPT VTSMQQQQQE QIVHGENNKS  300
PAVDDSMIAF GSRGESLTTL AAAAGGRAPE QFSHQQLDQS ENANNIGNKY NTGSGFLPPS  360
LDSDNIAETI KSFFPVEATT TSFQNYPPPP PDLRQQDLRL SLQSFQDPIM LHHQPQSHHE  420
PVLFAGTALG FDGGSGWSEQ QQQQHSEEQR FLYAGNSGHG GGFVFNSPAP AFGQFFSQRG  480
PLQSSNTPSV RAWIDPSVDH HPHPHHHYLS QLIHQGSVAG GGGFPVAGGF SGFHIPARIQ  540
GEEEHDGVSD K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	6e-58	TCP family protein