PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX76092.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 307aa MW: 35561.5 Da PI: 8.318

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX76092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.8	2.2e-06	38	62	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ dC s++rk++L+rH+ +H RDX76092.1 38 FVCSvdDCQASYRRKDHLTRHLLKH 62 89*********************99 PP
2	zf-C2H2	15	7.3e-05	67	92	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ F+ +sn krH H RDX76092.1 67 FKCPveNCNTEFTLQSNIKRHVEEvH 92 89*******************98777 PP
3	zf-C2H2	23	2e-07	107	131	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk+F+ s+L+rH +H RDX76092.1 107 FVCPeiGCGKVFKYASQLQRHEDSH 131 89*******************9888 PP
4	zf-C2H2	17	1.6e-05	197	222	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C+ C+ +Fs+ksnL +H ++ H RDX76092.1 197 FQCEfkGCSCTFSTKSNLDKHKKVvH 222 89********************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MHEAAFLDLM DQYQVGRPPV KLHQGCLGHA PFKIERPFVC SVDDCQASYR RKDHLTRHLL 60 KHQGNSFKCP VENCNTEFTL QSNIKRHVEE VHDDSSTSTS DKSHKQFVCP EIGCGKVFKY 120 ASQLQRHEDS HVKLESVDVI CLEPGCMKYF TNVQCLQAHV KSSHQYMTCD ICGTKQLKKN 180 IKRHLRTHEA SSSPETFQCE FKGCSCTFST KSNLDKHKKV VHFKEKPFLC GFPDCGMRFA 240 YKHVRDNHEK TAKHVFTLGD FEEADEEFRS RPRGGKKRTY PTVEMLIRKR VTPPSQLEDW 300 LFMQDSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.1	2e-91	C2H2 family protein