![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | RDX76197.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
| Family | GATA | ||||||||
| Protein Properties | Length: 135aa MW: 15725.2 Da PI: 10.6878 | ||||||||
| Description | GATA family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GATA | 36 | 9.9e-12 | 6 | 30 | 9 | 33 |
GATA 9 TplWRrgpdgnktLCnaCGlyyrkk 33
+plWR+gp+ ++ LCnaCG +y+k
RDX76197.1 6 SPLWRSGPEDKPVLCNACGSRYKKW 30
8*******88888**********95 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 135 aa Download sequence |
MVLPVSPLWR SGPEDKPVLC NACGSRYKKW GNLERYLPNH FQPKHLDKLK SLKGSRSNLL 60 VSSYETGGKT ARLWSPKIPS RKRSRVVYQK ITPMKRFHKQ LLSMWENYGN PNESSPEEHI 120 HMVRNSNHLP YGEKL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G17570.2 | 1e-10 | GATA family protein | ||||




