PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX76499.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 364aa MW: 40645.4 Da PI: 6.0007

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX76499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+++++ g+ R++k+c++rw +yl RDX76499.1 14 KGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.3	9.7e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ RDX76499.1 67 RGMFSQQEEDLIISLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGRHSCCVKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLLKQG 120 IDPTTHKPLT EGHVKEEKNI TETSPLSQGP SVPLTFPSSQ GSSLLMDSNY YDGGLTEASR 180 EIFMSKPALD PLSYYDFPMG VAQSAFNIPV SVSQYHTGLK ASDQSHFGPN SSYGFSSMPS 240 LTNSDHGNVS VTEFSDNNSA SKISSLFMND QVKESSSNSS NMSTIYPGGG CHMMENAGFS 300 WEGDNKFEPL FQFQENGIKS EDFKTSSWEE GQLQTHNSID FTSFPLTSLS EDLTGANFDV 360 FQHI

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGRHSCCVKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLLKQG  120
IDPTTHKPLT EGHVKEEKNI TETSPLSQGP SVPLTFPSSQ GSSLLMDSNY YDGGLTEASR  180
EIFMSKPALD PLSYYDFPMG VAQSAFNIPV SVSQYHTGLK ASDQSHFGPN SSYGFSSMPS  240
LTNSDHGNVS VTEFSDNNSA SKISSLFMND QVKESSSNSS NMSTIYPGGG CHMMENAGFS  300
WEGDNKFEPL FQFQENGIKS EDFKTSSWEE GQLQTHNSID FTSFPLTSLS EDLTGANFDV  360
FQHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	3e-83	MYB family protein