PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX76849.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HB-PHD

Protein Properties

Length: 721aa MW: 81949.2 Da PI: 9.3063

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX76849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.6	2.9e-10	509	550	12	53
HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 + L ++F++n p ++ re L+++lgL++++V+ WF+N R+ RDX76849.1 509 SQKLRQVFAENELPPRSIREGLSEELGLETEKVSKWFKNARY 550 688*************************************97 PP
2	PHD	41.9	2.3e-14	224	279	1	51
SBTTTSSTCT..TSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgksde..egelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C+ ++e ++++++Cd +Ck++fH+kCl+++l+ e++p g w+C+ C++k RDX76849.1 224 FCAKCKMNEElpDNDIIQCDgTCKRAFHQKCLDPPLDAEDIPPGepGWFCKFCECK 279 699999955556******56****************9999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MRDSEKKLNN KGSKKSSHLK ARTKCQGKKI KVKVGSKSHK NNVSTDTRKR VIGSSLKIKG 60 PRKDTSDKKL IAGQKLPTKN RKSSQKPSSN LQGKKASHSS RKEGKDADTA GKIQKLKRKR 120 KKKRQRNNVD LDDPSRLQRR TRYLLIKMKL EQNLIDAYSG EGWKGQSREK IRPEKELQRA 180 RKQILKCRLG IRDAIRQLDS LSSLSSIEDS AIAPDGSVYH EHIFCAKCKM NEELPDNDII 240 QCDGTCKRAF HQKCLDPPLD AEDIPPGEPG WFCKFCECKM EILEAMNAHL GTHFSLHSTW 300 QDVFKEEAAI PDGETALLNP EEEWPSDDSE DDDYDPERKE DSLNINTEGA NDSASDDLTS 360 STSLCSSDAE CSPVDGVSHE YFSVNSSIDS DESEDKACGP RQRKAVDYKK LYDEMFGKDA 420 PVYEQLSEDE DWGPGKRKRR EKESDAVDSL MTLHESENKH PNNEHNNMTR KDSSSVNIKR 480 HCFRIPRDAV EKCCMCFNFI SLSSSYETSQ KLRQVFAENE LPPRSIREGL SEELGLETEK 540 VSKWFKNARY LALKNRKHQA EGAADQLQSI TSKKNSRLQN QENADLLESK TSKINTTHSE 600 KNVKNVIGRK KMKSSSKKRH PEMPPPPGEN GNKDFLEISD DVSLKKLLKK RKRLVNFTFE 660 GDSQAAELEF ERLSKLKTKL DSMKQKLTTI QSYRVNGSDE PHSNQPSIVY VPTAVLREKV 720 E

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MRDSEKKLNN KGSKKSSHLK ARTKCQGKKI KVKVGSKSHK NNVSTDTRKR VIGSSLKIKG  60
PRKDTSDKKL IAGQKLPTKN RKSSQKPSSN LQGKKASHSS RKEGKDADTA GKIQKLKRKR  120
KKKRQRNNVD LDDPSRLQRR TRYLLIKMKL EQNLIDAYSG EGWKGQSREK IRPEKELQRA  180
RKQILKCRLG IRDAIRQLDS LSSLSSIEDS AIAPDGSVYH EHIFCAKCKM NEELPDNDII  240
QCDGTCKRAF HQKCLDPPLD AEDIPPGEPG WFCKFCECKM EILEAMNAHL GTHFSLHSTW  300
QDVFKEEAAI PDGETALLNP EEEWPSDDSE DDDYDPERKE DSLNINTEGA NDSASDDLTS  360
STSLCSSDAE CSPVDGVSHE YFSVNSSIDS DESEDKACGP RQRKAVDYKK LYDEMFGKDA  420
PVYEQLSEDE DWGPGKRKRR EKESDAVDSL MTLHESENKH PNNEHNNMTR KDSSSVNIKR  480
HCFRIPRDAV EKCCMCFNFI SLSSSYETSQ KLRQVFAENE LPPRSIREGL SEELGLETEK  540
VSKWFKNARY LALKNRKHQA EGAADQLQSI TSKKNSRLQN QENADLLESK TSKINTTHSE  600
KNVKNVIGRK KMKSSSKKRH PEMPPPPGEN GNKDFLEISD DVSLKKLLKK RKRLVNFTFE  660
GDSQAAELEF ERLSKLKTKL DSMKQKLTTI QSYRVNGSDE PHSNQPSIVY VPTAVLREKV  720
E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	123	LKRKRKKK
2	117	123	KRKRKKK
3	118	124	KRKRKKK
4	118	122	RKRKK
5	119	149	KRKKKRQRNNVDLDDPSRLQRRTRYLLIKMK
6	120	150	KRKKKRQRNNVDLDDPSRLQRRTRYLLIKMK
7	121	126	KKKRQR
8	121	151	KRKKKRQRNNVDLDDPSRLQRRTRYLLIKMK
9	437	442	RKRREK
10	644	652	LKKLLKKRK
11	646	652	KLLKKRK
12	648	654	LKKRKRL
13	649	679	KRKKKRQRNNVDLDDPSRLQRRTRYLLIKMK
14	650	680	KRKKKRQRNNVDLDDPSRLQRRTRYLLIKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29940.1	1e-137	HB-PHD family protein