PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX78317.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 197aa    MW: 22876.4 Da    PI: 9.9367
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX78317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF55.38.2e-182469348
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                +e   +r+vtfskR+ g++ K  ELS LC++e a+i+ s++gkly+
  RDX78317.1 24 VEQLNKRHVTFSKRKLGLFNKLTELSLLCQVETAMIVTSQNGKLYT 69
                677789***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MASSGRNTER NSNTKRRKIE MKEVEQLNKR HVTFSKRKLG LFNKLTELSL LCQVETAMIV  60
TSQNGKLYTC GYPDTDVVIH RYLVGGLPPH RNEARKKKQQ ELVESLRLEY EAVHNRLKEE  120
KERLQAITIE TQKSNFYFSS WWNLSTNHMD LENLEQFKTS LEHLKFNLVG AVQEKQLNSM  180
PLAIVPPMPS MSLMLIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-22M-type_MADS family protein