PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX78387.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 240aa MW: 26587.5 Da PI: 9.6905

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX78387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.1	1.5e-43	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk++rrkC+++Cv+apyfp ++p++fa+vhk+FGasnv kll++l+ +reda++sl+yeAear+rdPvyG+vg+i+ lq++l+ql++el+++k+ RDX78387.1 10 PCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQTELHHAKK 108 7**********************************************************************************************9998 PP DUF260 100 e 100 e RDX78387.1 109 E 109 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MSSSSSSSSP CAACKIQRRK CTQECVFAPY FPPDNPQRFA YVHKVFGASN VAKLLNELNA 60 AQREDAVKSL AYEAEARLRD PVYGCVGLIS ILQHRLKQLQ TELHHAKKEL ASYVGPHAML 120 PPPPPPPPRT FSLFPFKTAP PFGFNDDGAS ASHAAFNHLS LISPSPAADH SLPLPHHQHL 180 MRSPVHPKPQ TDPGSNEIGI VVLGRKQKGV KNKRETNMQK EDGRCILESR ICIDVRQRFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	9e-64	LBD family protein