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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX78405.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 190aa MW: 20936.5 Da PI: 8.6449 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 56.9 | 5.2e-18 | 5 | 52 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52
++++GVr++ +g+Wv+eIr+p +r++lg+f tae Aa+a+++a+
RDX78405.1 5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAIL 52
59*****999.**********8.....334*********************975 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 190 aa Download sequence |
MVQAKKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILISGQNAKT 60 NFPTPMNQPQ GAATATTPCV DPFSSPNVLS EHLVRKLKRS CKDSSPSLTC LRLDADNSHI 120 GVWQKGAGPH SDSNWIIRVE LGKKHGEGDS GVSSAGSPPK TCGDFDGDEE NRIAMQMIDE 180 LLNWNYPYGS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G11190.1 | 1e-60 | ERF family protein | ||||




