PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX78551.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 312aa MW: 35104.7 Da PI: 7.6802

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX78551.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.2	4.1e-13	32	88	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ + g ++ +e Aa+a++ a++k++g RDX78551.1 32 SIYRGVTRHRWTGRYEAHLWDkNCWNQsQSKKGRQGAYDDEEAAARAYDLAALKYWG 88 57*****************99999998888888******************98 PP
2	AP2	51.5	2.5e-16	131	182	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g RDX78551.1 131 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 182 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MAKKSQKSLK NNSSGKRTRK SVPRDSPPQR SSIYRGVTRH RWTGRYEAHL WDKNCWNQSQ 60 SKKGRQGAYD DEEAAARAYD LAALKYWGQD TILNFPLSNY EDKLKDMEAQ SKEEYIGSLR 120 RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL GTYATQEEAA TAYDMAAIEY 180 RGLNAVTNFD LSRYIKMEEN HQNPCSNPNN PDLELGSGSD EMTSSEGGGA STSSALGLLL 240 QSSKFKEMIE KSSSSTTAPP PAESNPSRRT FPEDIQTIFE SQDSGIYTEN DDIIFGDLDS 300 FGPPIFHFEL DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-100	AP2 family protein