PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX78905.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 457aa MW: 50146.6 Da PI: 9.8399

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX78905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.3e-05	76	98	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX78905.1 76 FVCEICHKGFQRDQNLQLHRRGH 98 89*******************88 PP
2	zf-C2H2	12.3	0.00051	152	174	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ RDX78905.1 152 WKCEKCSKIYAVQSDWKAHSKTC 174 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MFPTVISNST SLSEDASVSS GTKVQDLGGL NHALSNISPQ QQPLKIKKKR SLPGNPDPDA 60 EVIALSPKTL LATNRFVCEI CHKGFQRDQN LQLHRRGHNL PWKLKQRSNK EVKKKAYVCP 120 EPSCVHHNPS RALGDLTGIK KHYCRKHGEK KWKCEKCSKI YAVQSDWKAH SKTCGTREYR 180 CDCGTLFSRK DSFITHRAFC DALAEESARL SANQLAATVT TQTNPFQSLF LFQTQQNFQN 240 HQMTSFNQWD SSQENPNPSI SNIGIGSALH IKPESQSFHN TSLSSLLEQP LNKGMITSPL 300 GNQLHVPTQA PSSNAATSAY MSATALLQKA ATVGAAGMTG PSPAAVGVGP QRVMGHVTQL 360 GTGKFGTVSQ LDVVVPDNNY MRGFPARSLK SDRLTRDFLG LTGDANGATV DVSTNVKDML 420 TFTGGVDYHQ PHRQHHHHAL LKPQQRFGFA PETWGNC

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MFPTVISNST SLSEDASVSS GTKVQDLGGL NHALSNISPQ QQPLKIKKKR SLPGNPDPDA  60
EVIALSPKTL LATNRFVCEI CHKGFQRDQN LQLHRRGHNL PWKLKQRSNK EVKKKAYVCP  120
EPSCVHHNPS RALGDLTGIK KHYCRKHGEK KWKCEKCSKI YAVQSDWKAH SKTCGTREYR  180
CDCGTLFSRK DSFITHRAFC DALAEESARL SANQLAATVT TQTNPFQSLF LFQTQQNFQN  240
HQMTSFNQWD SSQENPNPSI SNIGIGSALH IKPESQSFHN TSLSSLLEQP LNKGMITSPL  300
GNQLHVPTQA PSSNAATSAY MSATALLQKA ATVGAAGMTG PSPAAVGVGP QRVMGHVTQL  360
GTGKFGTVSQ LDVVVPDNNY MRGFPARSLK SDRLTRDFLG LTGDANGATV DVSTNVKDML  420
TFTGGVDYHQ PHRQHHHHAL LKPQQRFGFA PETWGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-128	C2H2 family protein