PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX79100.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 300aa MW: 34243.2 Da PI: 5.9704

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX79100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5e-17	24	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd+ll ++++ +G g+W++ a + g++Rt+k+c++rw++yl RDX79100.1 24 RGPWSVEEDDLLTNYIANHGEGRWNLLAVRSGLRRTGKSCRLRWLNYL 71 89********************************************97 PP
2	Myb_DNA-binding	49.1	1.3e-15	77	120	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE +l+ +++ ++G++ W++Ia+ ++ gRt++++k++w++ RDX79100.1 77 RGNLTSEEKLLIFQLHSKWGNR-WSKIAQQLP-GRTDNEIKNYWRT 120 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MRLAMSTPSK SIMCSSEDDN ELRRGPWSVE EDDLLTNYIA NHGEGRWNLL AVRSGLRRTG 60 KSCRLRWLNY LKPDVKRGNL TSEEKLLIFQ LHSKWGNRWS KIAQQLPGRT DNEIKNYWRT 120 RIQKQAKYVK FETHRTGFLE LVKGLQMTTR CLQKAQEESS PSPMSIQDQA TPFPFDGASH 180 YSSFGIGTAP TTQITSQGGP YYLNQHEQNS DSDHNNGSCT TSQFQALDGC DFGICSYDGY 240 SINNSAYDLD PFNLTTTMIA EDLELPVIDC QLSETNLLNK EFTCSTWSMD ELWQFGNIQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	4e-65	MYB family protein