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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX79404.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | WRKY | ||||||||
| Protein Properties | Length: 639aa MW: 69874.9 Da PI: 8.569 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 100.8 | 7.9e-32 | 300 | 357 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k
RDX79404.1 300 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 357
8****************************************.***************85 PP
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| 2 | WRKY | 106 | 1.9e-33 | 470 | 528 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
RDX79404.1 470 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 528
59********************************************************7 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 639 aa Download sequence |
MTKKRGSHMN RVVREIQRCK STEFCSPSIS DRTFKDTKNT QTHNTNTHIT KCIFEITLLP 60 SLLLPPPTMD AAAAATSAEP RPTSELHLNG TSEDPNRTGS GHNSTARYKL MSPAKLPISR 120 SPCITIPPGL SPTSFLESPV LLSNMKVEPS PTTGSLRKLQ QYGSMASAAS ATFPVTTACF 180 NTNTVDDRKS SFFEFKPLNR SNMVPADFNN HVSKQSTQVE GPGKAQSYAS SPLVESEISV 240 PSNELSLSSP VQMVSSGASA PVDVDLDDIN YKGNTATKLQ ASHVEVRGSG LSVAAEKTSD 300 DGYNWRKYGQ KHVKGSEFPR SYYKCTHPNC EVKKLFERSH DGQITEIIYK GTHDHPKPQP 360 SCRYSTGTVM SIQREISDKA SSDKASTMYG QVSHAAEPNS TPESSPVATN DDGLEGARFV 420 SHRTNEEIDD DDPFSKRRKM ELGNADITPV VKPIREPRVV VQTLSEVDIL DDGYRWRKYG 480 QKVVRGNPNP RSYYKCTNAG CPVRKHVERA SHDPKAVITT YEGKHNHDVP AARNSSHDMA 540 VAGSAGGQTR IKLEESDTIS LDLGMGISSP AQHRSNTEFG NISNSNFKFV HTTSAPVYFG 600 VLNNSSNPYG SRDNRSDAPS LNHSSYPCPQ SMGRILMGP |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G26640.2 | 0.0 | WRKY family protein | ||||




