PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX79586.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 203aa    MW: 22936.2 Da    PI: 8.6828
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX79586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.31.3e-201557749
                HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                  +qvtfskRr+g++KKA+ELS+LC+a+v +++fs+ +k y +
  RDX79586.1 15 NTKQVTFSKRRTGLFKKANELSILCGAQVGIVVFSPGNKPYSF 57
                568*********************************9998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MGRRKIEIRE VNDPNTKQVT FSKRRTGLFK KANELSILCG AQVGIVVFSP GNKPYSFGHP  60
SVEAVAEKFL EENVGESSGV QASNEVGGDL NGLNEQLSEV QAQIRHEEKK GKDLDQRLKQ  120
HQLTHPSNYK ELQLSYLEIQ RKVKDYLDAI EVSESMMLLA QQPVVGVTKQ GFLHPKTLSL  180
RDPVMLQKIE RCSLRNPEIV RQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.13e-34M-type_MADS family protein