PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX80848.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB_related

Protein Properties

Length: 459aa MW: 52037.3 Da PI: 6.7451

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX80848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.3e-07	338	385	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E ++lv+++ ++G g+W+ I r + Rt+ +++++w+++l RDX80848.1 338 WTLPEVLKLVEGISEYGVGRWTDIKRFLFsssSYRTPIDLRDKWRNLL 385 9*************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MDREEYLRKC SNMKCQRVHV DESYVPALED EVMEVERLLA EPRNDHASMD GSLDSHTTLN 60 CKDDLELEVL DGLLDDVEID DLEGTDGFSG ACEEYFLDFE FADKVEEVLL GSGPFEGPFL 120 QNSCSESHSS GLSGSSIVGG VLESTKVPIA QSECKNDSLD ETVTYESHGA FRNSPSQPSK 180 VKCRYNISLD VQHLQELDNN RHLAGGILTC KKEKGPVEKC QPAALREKRF RRPTQRYIEE 240 FSNSGSKEKV STAGTKTKHL SDSSCNVLHI RIKSLKSPSE KSSNENSDAK LPELQVRKGR 300 LKKEKHECDE SFPSESEDGC STSKRSRRKD RRKHQKMWTL PEVLKLVEGI SEYGVGRWTD 360 IKRFLFSSSS YRTPIDLRDK WRNLLRASSA HKNKREVEQN DELALRPLPF NVVDRVRELA 420 EIHPYPRQRG SKKLRVSEAG FSVIAKDSPP VSFSKRHEK

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MDREEYLRKC SNMKCQRVHV DESYVPALED EVMEVERLLA EPRNDHASMD GSLDSHTTLN  60
CKDDLELEVL DGLLDDVEID DLEGTDGFSG ACEEYFLDFE FADKVEEVLL GSGPFEGPFL  120
QNSCSESHSS GLSGSSIVGG VLESTKVPIA QSECKNDSLD ETVTYESHGA FRNSPSQPSK  180
VKCRYNISLD VQHLQELDNN RHLAGGILTC KKEKGPVEKC QPAALREKRF RRPTQRYIEE  240
FSNSGSKEKV STAGTKTKHL SDSSCNVLHI RIKSLKSPSE KSSNENSDAK LPELQVRKGR  300
LKKEKHECDE SFPSESEDGC STSKRSRRKD RRKHQKMWTL PEVLKLVEGI SEYGVGRWTD  360
IKRFLFSSSS YRTPIDLRDK WRNLLRASSA HKNKREVEQN DELALRPLPF NVVDRVRELA  420
EIHPYPRQRG SKKLRVSEAG FSVIAKDSPP VSFSKRHEK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	297	304	RKGRLKKE
2	324	332	KRSRRKDRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-23	MYB_related family protein